API Reference

• Data Generation
  • Structure Alignement
  • DataGenerator
  • NormalizeData
  • GridTools
• Learning
  • DataSet: create a torch dataset
  • NeuralNet: perform deep learning
  • modelGenerator: generate NN architecture
• Features
  • Atomic Feature
  • Buried Surface Area
  • FullPSSM
  • PSSM Information Content
  • Contact Residue Density
  • Generic Feature Class
• Targets
  • Binary class
  • CAPRI class
  • DockQ
  • RMSDs & FNAT
• Tools
  • Solvent Accessible Surface Area
  • Sparse 3D Matrix